Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGGGTGTCCCAGGGACTGTGTGCTCAGGA
.(((((((((((..........&.))))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016257
GeneSymbolHPCAL4
Binding site3513,3543
Score0.846
Seed1
Au0.397
Energy-16.7
Binding len14
Me-6.908
Phylopstem0.3153310083333334
Phylopflank0.4399841412500001
Longest consecutive pairings7
Position of longest consecutive pairings6
Pairings in 3prime end0
Position3UTR
2D Structure