Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGGAGAGCACAGCTGCC
..(((((((.(.((.((((((&))))))..)).).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016257
GeneSymbolHPCAL4
Binding site32,53
Score0.846
Seed1
Au0.25
Energy-21.4
Binding len21
Me-10.282
Phylopstem0.6070443857142858
Phylopflank1.0770177851785714
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure