Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTGCTGTGGACTACAACACATGTGCAGGTGTGTGGTCCCAGGA
.(((((((((((.((((.((..&.)).))))..))))))...))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016258
GeneSymbolYTHDF2
Binding site1600,1647
Score0.831
Seed1
Au0.5
Energy-18.3
Binding len25
Me-5.082
Phylopstem7.427976428571429
Phylopflank6.707252396249999
Longest consecutive pairings6
Position of longest consecutive pairings9
Pairings in 3prime end5
PositionCDS
2D Structure