Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCCAACTGCAACTTGCATGTGCCTGGTCCCATGGCTGTGAA
(((((((((((((((...(((&)))..)))))))).......................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016267
GeneSymbolVGLL1
Binding site401,445
Score0.846
Seed1
Au0.426
Energy-19.0
Binding len44
Me-4.171
Phylopstem0.21959873947368413
Phylopflank0.5456958387500002
Longest consecutive pairings8
Position of longest consecutive pairings31
Pairings in 3prime end5
PositionCDS
2D Structure