Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCTGCTGCTGGAGA
((.((((.((((((((.....&)))))))).)))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016274
GeneSymbolPLEKHO1
Binding site1388,1405
Score0.846
Seed0
Au0.368
Energy-20.2
Binding len17
Me-7.809
Phylopstem2.4330802125
Phylopflank2.4533795974999997
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end3
PositionCDS
2D Structure