Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTACCTCTGTAGCATTGTGAA
((((((((((((..(((((..&)))))..)))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016275
GeneSymbolSELENOT
Binding site3394,3416
Score0.923
Seed1
Au0.667
Energy-18.6
Binding len22
Me-6.084
Phylopstem0.3577917
Phylopflank0.23448762355769232
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure