Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGACAACATTGTGACCTACAACGATGAAGGCGGCGGGGA
...((((((.((((((.....&.)))))).)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_016279
GeneSymbolCDH9
Binding site2130,2170
Score0.846
Seed0
Au0.5
Energy-22.9
Binding len15
Me-7.757
Phylopstem4.144266
Phylopflank4.3387017625
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end3
PositionCDS
2D Structure