Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATTGTGCAACCGCTTTGTAAA
((((((..(((((((((....&.))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016279
GeneSymbolCDH9
Binding site2902,2923
Score0.962
Seed0
Au0.75
Energy-19.2
Binding len18
Me-7.795
Phylopstem2.844683444444444
Phylopflank0.9485974675
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end4
Position3UTR
2D Structure