Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACACCTTAACTAGCTGCTGCAT
.((((((.((((.((((((((&)))))))))).......)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016281
GeneSymbolTAOK3
Binding site3587,3614
Score0.923
Seed1
Au0.706
Energy-23.3
Binding len27
Me-7.396
Phylopstem6.3606856125
Phylopflank5.171621455
Longest consecutive pairings10
Position of longest consecutive pairings17
Pairings in 3prime end8
Position3UTR
2D Structure