Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCGAGAGCTAGAGTACAGGCAGCTGCAC
.(((((((((((((.(..(((&)))..).)))).........))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016281
GeneSymbolTAOK3
Binding site2418,2448
Score0.808
Seed1
Au0.456
Energy-21.4
Binding len30
Me-4.529
Phylopstem7.161876818181818
Phylopflank6.798142674999999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure