Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCAGGATGGCCGGGC
.((((((......((((((...&)))))).....)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016284
GeneSymbolCNOT1
Binding site5354,5372
Score0.846
Seed1
Au0.456
Energy-18.6
Binding len18
Me-15.867
Phylopstem6.336936833333334
Phylopflank5.975058925000001
Longest consecutive pairings6
Position of longest consecutive pairings12
Pairings in 3prime end5
PositionCDS
2D Structure