Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGTTGAAGCAGTGTGTGCGTCAGGC
.(((((((((((.(((......&.))).)))))))..)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016284
GeneSymbolCNOT1
Binding site4435,4460
Score0.846
Seed1
Au0.412
Energy-17.1
Binding len19
Me-5.082
Phylopstem4.691086807692307
Phylopflank5.64169483625
Longest consecutive pairings7
Position of longest consecutive pairings7
Pairings in 3prime end2
PositionCDS
2D Structure