Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTTGCAGAAGAAAACCCCAGCCAAGTCCCCAGGGAAGGCCGCATCTGTGAAGCAGAGAGGGTCC
.((((((((.((((((((...&.)))))))).)))...............))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_016287
GeneSymbolHP1BP3
Binding site1490,1555
Score0.923
Seed1
Au0.412
Energy-27.4
Binding len34
Me-5.036
Phylopstem-0.17292049999999998
Phylopflank0.5103198024999999
Longest consecutive pairings8
Position of longest consecutive pairings25
Pairings in 3prime end5
PositionCDS
2D Structure