Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGCCCGGCTGCAAC
(((((((((.(((((...(((&))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354337
GeneSymbolKANK1
Binding site3931,3949
Score0.923
Seed1
Au0.382
Energy-23.5
Binding len18
Me-5.413
Phylopstem5.217137333333333
Phylopflank4.7296545175
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure