Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGGCTGCAGCAGAGAGATGCAGA
((((((((((((((((.....&)))).))))))).......))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016290
GeneSymbolUIMC1
Binding site2141,2166
Score1.0
Seed1
Au0.5
Energy-17.9
Binding len25
Me-3.938
Phylopstem3.4947695416666664
Phylopflank3.8804192087499993
Longest consecutive pairings7
Position of longest consecutive pairings13
Pairings in 3prime end3
PositionCDS
2D Structure