Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATTGCAGCCCACAACGCTGCAC
.((((((((.(((((((((((&))).))))))))))....)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016297
GeneSymbolPCYOX1
Binding site1438,1463
Score0.923
Seed1
Au0.397
Energy-23.2
Binding len25
Me-5.036
Phylopstem3.2167255000000003
Phylopflank3.8159303624999987
Longest consecutive pairings10
Position of longest consecutive pairings11
Pairings in 3prime end8
PositionCDS
2D Structure