Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGTGCAGCTGCGGATGCC
..(((.(((((((((((.(((&))).))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016297
GeneSymbolPCYOX1
Binding site81,101
Score0.846
Seed0
Au0.294
Energy-22.3
Binding len20
Me-6.858
Phylopstem0.593801690909091
Phylopflank0.52810855
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end7
PositionCDS
2D Structure