Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGTCATGTCTGCTAGGTA
((((((((.((.(((((((...&)))).))))).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016300
GeneSymbolARPP21
Binding site2907,2927
Score0.923
Seed1
Au0.603
Energy-18.4
Binding len20
Me-8.341
Phylopstem5.2085799999999995
Phylopflank4.506484582499999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure