Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCTCCCTTTGGGGATTTAATGTCTGGTGCTGCCGCCTGAGTTTCAAGAATTAAAGCTGCAAG
(((((((((((((.(((....&.))).)))))..................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016306
GeneSymbolDNAJB11
Binding site1464,1529
Score0.923
Seed1
Au0.544
Energy-20.6
Binding len37
Me-4.794
Phylopstem2.4327671741935477
Phylopflank1.4477829349999998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure