Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGGATGGCCCAGCTGCC
..(((((((.((((((..(((&)))...))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016310
GeneSymbolPOLR3K
Binding site350,370
Score0.846
Seed1
Au0.338
Energy-21.3
Binding len20
Me-6.2
Phylopstem0.30969785714285714
Phylopflank-0.17479441
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure