Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATCAACTGCAGCTCCGAG
(((.(((((((((((...(((&)))..))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330619
GeneSymbolIQSEC1
Binding site1509,1530
Score1.0
Seed0
Au0.412
Energy-22.2
Binding len21
Me-7.203
Phylopstem2.385300545454545
Phylopflank2.4057047337499995
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end5
PositionCDS
2D Structure