Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGGCAACCGGCAGAAGCAGT
((((..((((((((((.(((.&)))..))))))).)))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330619
GeneSymbolIQSEC1
Binding site1796,1819
Score0.846
Seed0
Au0.397
Energy-22.3
Binding len23
Me-9.958
Phylopstem1.1312874545454543
Phylopflank0.82223694
Longest consecutive pairings7
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure