Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGTAAGGGGCTGCTTACTTCTGGGGTA
..(((((((((((((((((..&))))...))))))))........))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_016327
GeneSymbolUPB1
Binding site1388,1417
Score0.846
Seed1
Au0.529
Energy-24.1
Binding len29
Me-4.957
Phylopstem-0.28770931785714293
Phylopflank-0.31913275124999996
Longest consecutive pairings8
Position of longest consecutive pairings14
Pairings in 3prime end6
Position3UTR
2D Structure