Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCACTGGCCCAGCAGCTGA
...(((((((((((((((((.&)))).)).))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016327
GeneSymbolUPB1
Binding site3053,3075
Score0.846
Seed0
Au0.471
Energy-20.1
Binding len22
Me-6.515
Phylopstem0.4831177333333333
Phylopflank0.07169181449999999
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure