Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGCCCGGCTGCAAC
(((((((((.(((((...(((&))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354342
GeneSymbolKANK1
Binding site3779,3797
Score0.923
Seed1
Au0.382
Energy-23.5
Binding len18
Me-5.413
Phylopstem5.303165555555555
Phylopflank4.781365735
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure