Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTGACCCAGCCGAGGCTGCC
..((((((.((((((((((((&))))))...)))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016329
GeneSymbolSFMBT1
Binding site3789,3812
Score1.0
Seed1
Au0.529
Energy-22.4
Binding len23
Me-6.013
Phylopstem3.7239527333333333
Phylopflank3.1191165274999992
Longest consecutive pairings6
Position of longest consecutive pairings17
Pairings in 3prime end8
Position3UTR
2D Structure