Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAAGCGCGCTGCGGT
(((((((.(((.((((.....&)))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016332
GeneSymbolMSRB1
Binding site15,31
Score0.846
Seed1
Au0.333
Energy-20.4
Binding len16
Me-9.598
Phylopstem1.110700142857143
Phylopflank-0.26878500346153844
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure