Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTAGGAAAGCGGCTGTT
..((((((((..((.((((..&)))).))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016332
GeneSymbolMSRB1
Binding site1046,1064
Score0.846
Seed1
Au0.485
Energy-20.0
Binding len18
Me-11.864
Phylopstem0.8087030374999998
Phylopflank3.35708733375
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure