Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTACAGCCTTGTTCGGGAGTCTAGCAGTTCTCGCT
..(((((((((((((((((((&)))))))))))...............))))))...)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016333
GeneSymbolSRRM2
Binding site746,784
Score0.923
Seed1
Au0.515
Energy-22.1
Binding len38
Me-4.957
Phylopstem2.9416411351351357
Phylopflank2.98465527
Longest consecutive pairings11
Position of longest consecutive pairings27
Pairings in 3prime end8
PositionCDS
2D Structure