Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGGAACTCCAGCTGCC
..(((((((.((((.((((((&)))))).)))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016339
GeneSymbolRAPGEFL1
Binding site4020,4040
Score0.923
Seed1
Au0.353
Energy-25.9
Binding len20
Me-6.935
Phylopstem0.40865071428571426
Phylopflank-0.22610102000000004
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure