Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGGGACCACAGTTACAGA
(((.(((((.((((.((((((&)))))).)))).))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016340
GeneSymbolRAPGEF6
Binding site5255,5277
Score0.846
Seed0
Au0.529
Energy-22.2
Binding len22
Me-8.948
Phylopstem4.814037833333333
Phylopflank5.254941392499998
Longest consecutive pairings6
Position of longest consecutive pairings16
Pairings in 3prime end7
Position3UTR
2D Structure