Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAGAAAATCGACAGCTGCC
..((((((((((((....((.&))....))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354344
GeneSymbolKANK1
Binding site560,580
Score0.846
Seed1
Au0.5
Energy-19.6
Binding len20
Me-5.925
Phylopstem1.8994827615384613
Phylopflank1.4945346898749998
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure