Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGCTGGGCGGCTGCACTCAGCATCACCCCTTCCTGGGTG
..(((((((((((..((((((&)).)))).)))))))...................)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_016352
GeneSymbolCPA4
Binding site1544,1583
Score0.846
Seed1
Au0.441
Energy-23.8
Binding len39
Me-6.549
Phylopstem-0.21791628333333338
Phylopflank-0.013658489999999995
Longest consecutive pairings7
Position of longest consecutive pairings24
Pairings in 3prime end6
Position3UTR
2D Structure