Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCACAGCTACTCGCAGCTGCT
..((((((((((((((.((((&))))..)))))....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016352
GeneSymbolCPA4
Binding site936,961
Score0.923
Seed1
Au0.5
Energy-26.4
Binding len25
Me-4.957
Phylopstem4.716746888888889
Phylopflank2.146071407500001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure