Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCCTGCAACGCTGCCTGCAGCTGCC
..(((((((((((((((.((.&)).))))))......))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016354
GeneSymbolSLCO4A1
Binding site1653,1678
Score0.885
Seed1
Au0.368
Energy-23.2
Binding len25
Me-4.957
Phylopstem2.3898117142857154
Phylopflank1.5189678925
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure