Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGAGACTGTAGCTGTAT
.(((((((((((((....(((&)))..))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016354
GeneSymbolSLCO4A1
Binding site1789,1808
Score1.0
Seed1
Au0.471
Energy-23.0
Binding len19
Me-4.762
Phylopstem3.900091315384615
Phylopflank1.27680823125
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure