Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTTGCCTTTTTTAGCTGCAAG
(((((((((.(((...(((((&)))))..))).....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016355
GeneSymbolDDX47
Binding site1653,1678
Score0.923
Seed1
Au0.544
Energy-18.6
Binding len25
Me-7.005
Phylopstem0.09281504444444445
Phylopflank-0.07546771999999999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure