Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTGCAATGATGCTGGGC
.((((((((.((.(((((....&))))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016357
GeneSymbolLIMA1
Binding site2408,2425
Score0.846
Seed1
Au0.574
Energy-16.1
Binding len17
Me-6.325
Phylopstem2.3729391374999995
Phylopflank2.5299121149999997
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure