Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAGCCCAGCTTGCAAA
(((((((((.(((((......&)))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016357
GeneSymbolLIMA1
Binding site1556,1572
Score1.0
Seed1
Au0.441
Energy-19.2
Binding len16
Me-5.413
Phylopstem0.59775627
Phylopflank0.41334023124999997
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end2
PositionCDS
2D Structure