Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAAGTACCAGGCAGCTGTG
..(((((((((((.....(((&)))....)))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016357
GeneSymbolLIMA1
Binding site937,958
Score0.923
Seed1
Au0.544
Energy-18.8
Binding len21
Me-6.782
Phylopstem0.1788638615384615
Phylopflank0.7070368224999997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure