Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGGCGACCGCTGGATCCTCACAGCTGCC
..((((((((((((((..(((&)))..))))))))...........)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354346
GeneSymbolC1R
Binding site1591,1622
Score0.846
Seed1
Au0.338
Energy-23.2
Binding len31
Me-4.957
Phylopstem1.4602596840000004
Phylopflank2.1561625975
Longest consecutive pairings8
Position of longest consecutive pairings18
Pairings in 3prime end6
PositionCDS
2D Structure