Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCGGGGGACAGCCGGGGCTGGAAG
((.(((((.(((((((.....&.))))))).))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354346
GeneSymbolC1R
Binding site992,1016
Score1.0
Seed0
Au0.412
Energy-23.3
Binding len18
Me-6.552
Phylopstem2.0874224285714287
Phylopflank1.7622658749999998
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end3
PositionCDS
2D Structure