Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCGATGCAGCAGCTGCAC
.(((((((((...((((.(((&)))...))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354346
GeneSymbolC1R
Binding site20,40
Score0.923
Seed1
Au0.324
Energy-20.7
Binding len20
Me-11.254
Phylopstem0.2988228444444444
Phylopflank0.17872122749999997
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure