Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGGGCAGGACGCTGCACTTTACCGCGGCTGTC
..(((((((((((((((..((&.))..))))....))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016360
GeneSymbolTACO1
Binding site324,357
Score0.846
Seed1
Au0.324
Energy-23.6
Binding len25
Me-4.957
Phylopstem1.5065788052631575
Phylopflank1.9738780962499995
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure