Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGAGCTGCAGGAGGCCGATGGCCAGTGTCCGGTCGACCGCAGCCTGCT
..(((((((((((((...((.&.))...)))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016361
GeneSymbolACP6
Binding site569,619
Score0.846
Seed1
Au0.397
Energy-26.1
Binding len21
Me-5.19
Phylopstem-0.09792920714285716
Phylopflank-0.34045264625
Longest consecutive pairings10
Position of longest consecutive pairings5
Pairings in 3prime end4
PositionCDS
2D Structure