Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCCTGGGGCTGGCCGGCTGCAT
.(((((((((((((.((.(((&))).)).)))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016369
GeneSymbolCLDN18
Binding site103,126
Score0.846
Seed1
Au0.309
Energy-19.4
Binding len23
Me-4.529
Phylopstem2.9490697000000003
Phylopflank3.69672146625
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure