Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTAGAACCCAGCTGCAT
.((((((((.((((.(.((((&))))).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016370
GeneSymbolRAB9B
Binding site1226,1245
Score1.0
Seed1
Au0.662
Energy-24.7
Binding len19
Me-5.771
Phylopstem0.2314154
Phylopflank0.75696993375
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure