Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGCATTATGGACTGGCATGCACACGATCGCAGCCCAGCTGCT
..(((((((.((((((.....&.))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016376
GeneSymbolANKFY1
Binding site1818,1864
Score0.923
Seed1
Au0.412
Energy-23.1
Binding len15
Me-6.2
Phylopstem-0.9202924857142857
Phylopflank-0.19767574
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure