Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTGCTGCAAAAGTTGCAAT
((((((((...((.(((((((&))))))).))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354361
GeneSymbolGTDC1
Binding site140,162
Score1.0
Seed1
Au0.588
Energy-19.1
Binding len22
Me-9.918
Phylopstem0.7282324125
Phylopflank1.5353823412499996
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure