Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTCAGAAAGAAGAGGGGCCGGG
..((((((((((((((((....&)))))).....)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330620
GeneSymbolMSANTD1
Binding site501,523
Score0.846
Seed1
Au0.397
Energy-21.7
Binding len22
Me-4.957
Phylopstem-0.5870119238095238
Phylopflank-0.4033478537500001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure